sub:assertion {
<
http://purl.obolibrary.org/obo/RO_0002303>
rdfs:label "has habitat" .
sub:assertion dct:description "Such a nanopublication expresses an association between an organism taxon (e.g. a species) and an environment, for example expressing that the organisms of the given species inhabit the specified environment." ;
a nt:AssertionTemplate ,
nt:UnlistedTemplate ;
rdfs:label "Test template" ;
nt:hasDefaultProvenance ns1:RA2VjRiJ5AsNnPHDXuOqvsEJwTwqtj5rBb-OFkpPOzd9s ;
nt:hasNanopubLabelPattern "${taxonname} - ${relation} - ${environment}" ;
nt:hasStatement sub:st00 ,
sub:st05 ,
sub:st10 ,
sub:st11 ,
sub:st12 ,
sub:st20 ,
sub:st40 ,
sub:st60 ;
nt:hasTag "Biodiversity" .
sub:association a nt:IntroducedResource ,
nt:LocalResource ;
rdfs:label "this association" .
sub:comment a nt:LongLiteralPlaceholder ;
rdfs:label "short explanation related to the above statement" .
sub:environment a nt:GuidedChoicePlaceholder ;
rdfs:label "the environment to be associated with the taxon" ;
nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=envo&fieldList=iri,label,description&q=" .
sub:lifecyclestage a nt:RestrictedChoicePlaceholder ;
rdfs:label "the life cycle stage" ;
nt:possibleValuesFrom ns1:RAVZS2MV-siFEqsgFTtgSoKA5qJkp7r1nM_n-MqPkvgdE .
sub:relation a nt:GuidedChoicePlaceholder ;
rdfs:label "the type of relation between the taxon and the environment" ;
nt:possibleValue <
http://purl.obolibrary.org/obo/RO_0002303> ;
nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=ro&fieldList=iri,label,description&q=" .
sub:st00 rdf:object <
https://w3id.org/biolink/vocab/OrganismTaxonToEnvironmentAssociation> ;
rdf:predicate rdf:type ;
rdf:subject sub:association .
sub:st05 rdf:object sub:relation ;
rdf:predicate <
https://w3id.org/biolink/vocab/predicate> ;
rdf:subject sub:association .
sub:st10 rdf:object sub:taxon ;
rdf:predicate <
https://w3id.org/biolink/vocab/subject> ;
rdf:subject sub:association .
sub:st11 rdf:object sub:taxonname ;
rdf:predicate <
https://w3id.org/kpxl/biodiv/terms/hasTaxonName> ;
rdf:subject sub:taxon .
sub:st12 rdf:object sub:taxondef ;
rdf:predicate <
https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition> ;
rdf:subject sub:taxon ;
a nt:OptionalStatement .
sub:st20 rdf:object sub:lifecyclestage ;
rdf:predicate <
https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage> ;
rdf:subject sub:association ;
a nt:OptionalStatement .
sub:st40 rdf:object sub:environment ;
rdf:predicate <
https://w3id.org/biolink/vocab/object> ;
rdf:subject sub:association .
sub:st60 rdf:object sub:comment ;
rdf:predicate rdfs:comment ;
rdf:subject sub:association ;
a nt:OptionalStatement .
sub:taxon a nt:LocalResource ;
rdfs:label "the taxon concept" .
sub:taxondef a nt:ExternalUriPlaceholder ;
rdfs:label "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)" ;
nt:hasRegex "(https://doi.org/|https://treatment.plazi.org/id/).+" .
sub:taxonname a nt:GuidedChoicePlaceholder ;
rdfs:label "search and select from list (if not found, you may paste URL from IPNI, MycoBank, Index Fungorum, or ZooBank)" ;
nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .
rdf:type rdfs:label "is a" .
rdfs:comment rdfs:label "has the free-text comment" .
<
https://w3id.org/biolink/vocab/OrganismTaxonToEnvironmentAssociation>
rdfs:label "association of an organism taxon to an environment" .
<
https://w3id.org/biolink/vocab/object>
rdfs:label "links the taxon to the environment" .
<
https://w3id.org/biolink/vocab/predicate>
rdfs:label "refers to the relation (between taxon and environment)" .
<
https://w3id.org/biolink/vocab/subject>
rdfs:label "refers to" .
<
https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage>
rdfs:label "refers to the taxon's life cycle stage" .
<
https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition>
rdfs:label "is used as defined in" .
<
https://w3id.org/kpxl/biodiv/terms/hasTaxonName>
rdfs:label "has the name - links a taxon usage to a taxon name" .
}