Nanopublications

@prefix this: <https://w3id.org/np/RAYPTZVeBhqbabhNwh9aB0AoK_bz_Uk5Z3bEh-8gs0QiU> .
@prefix sub: <https://w3id.org/np/RAYPTZVeBhqbabhNwh9aB0AoK_bz_Uk5Z3bEh-8gs0QiU#> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix ns1: <http://purl.org/np/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix npx: <http://purl.org/nanopub/x/> .

sub:Head {
  this: np:hasAssertion sub:assertion ;
    np:hasProvenance sub:provenance ;
    np:hasPublicationInfo sub:pubinfo ;
    a np:Nanopublication .
}

sub:assertion {
  <http://purl.obolibrary.org/obo/RO_0001019> rdfs:label "contains" .
  rdf:type rdfs:label "is an" .
  <https://w3id.org/biolink/vocab/object> rdfs:label "refers to the chemical" .
  <https://w3id.org/biolink/vocab/predicate> rdfs:label "refers to the relation (between taxon and chemical)" .
  <https://w3id.org/biolink/vocab/subject> rdfs:label "refers to the organism taxon" .
  sub:assertion dct:description "Such a nanopublication expresses an association between an organism taxon (e.g. a species) and a chemical." ;
    a nt:AssertionTemplate , nt:UnlistedTemplate ;
    rdfs:label "Expressing an association between an organism taxon and a chemical" ;
    nt:hasNanopubLabelPattern "${taxon} ${relation} ${chemical}" ;
    nt:hasStatement sub:st0 , sub:st1 , sub:st2 , sub:st3 ;
    nt:hasTag "Biodiversity" ;
    nt:hasTargetNanopubType <https://w3id.org/kpxl/biodiv/terms/BiodivNanopub> .
  sub:association a nt:IntroducedResource , nt:LocalResource ;
    rdfs:label "this association" .
  sub:chemical a nt:GuidedChoicePlaceholder ;
    rdfs:label "the chemical to be associated with the taxon" ;
    nt:possibleValuesFromApi "https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" .
  sub:relation a nt:GuidedChoicePlaceholder ;
    rdfs:label "the type of relation between the taxon and the gene" ;
    nt:possibleValue <http://purl.obolibrary.org/obo/RO_0001019> ;
    nt:possibleValuesFromApi "https://www.ebi.ac.uk/ols/api/select?ontology=ro&fieldList=iri,label,description&q=" .
  sub:st0 rdf:object <https://w3ihttps://w3id.org/kpxl/biodiv/terms/OrganismTaxonToChemicalAssociation> ;
    rdf:predicate rdf:type ;
    rdf:subject sub:association .
  sub:st1 rdf:object sub:taxon ;
    rdf:predicate <https://w3id.org/biolink/vocab/subject> ;
    rdf:subject sub:association .
  sub:st2 rdf:object sub:relation ;
    rdf:predicate <https://w3id.org/biolink/vocab/predicate> ;
    rdf:subject sub:association .
  sub:st3 rdf:object sub:chemical ;
    rdf:predicate <https://w3id.org/biolink/vocab/object> ;
    rdf:subject sub:association .
  sub:taxon a nt:GuidedChoicePlaceholder ;
    rdfs:label "the organism taxon, e.g. a species" ;
    nt:possibleValuesFromApi "https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" .
  <https://w3ihttps://w3id.org/kpxl/biodiv/terms/OrganismTaxonToChemicalAssociation> rdfs:label "organism taxon to chemical association" .
}

sub:provenance {
sub:assertion prov:wasAttributedTo orcid:0000-0002-1267-0234 .
}

sub:pubinfo {
  sub:sig npx:hasAlgorithm "RSA" ;
    npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQD4Wj537OijfOWVtsHMznuXKISqBhtGDQZfdO6pbb4hg9EHMcUFGTLbWaPrP783PHv8HMAAPjvEkHLaOHMIknqhaIa5236lfBO3r+ljVdYBElBcLvROmwG+ZGtmPNZf7lMhI15xf5TfoaSa84AFRd5J2EXekK6PhaFQhRm1IpSYtwIDAQAB" ;
    npx:hasSignature "M1sBS+gFjvHJS1NoIsGIBb0ucaOiJMK+DrxkUoiH9nXsoemtcGVZ8Qf/mYYj3pqLOU69lRW9frUqS3s/Db4DMRX3/mjQsPg6dhY/KK5/aQWddjl0b8t8hp7tqv9aXBviHq+557u1kXDYd/YuQcAuOW+Cj1hGobM9Ir3YDEuEF7g=" ;
    npx:hasSignatureTarget this: .
  this: dct:created "2024-02-06T16:10:45.815Z"^^xsd:dateTime ;
    dct:creator orcid:0000-0002-1267-0234 , orcid:0000-0003-3389-2191 ;
    dct:license <https://creativecommons.org/licenses/by/4.0/> ;
    rdfs:label "Template: Expressing an association between an organism taxon and a chemical" ;
    prov:wasDerivedFrom <https://w3id.org/np/RAxvh4t8yoViwe1P-Qbole8o-ZIlURCj7uvDND9mIBr6M> ;
    nt:wasCreatedFromProvenanceTemplate ns1:RANwQa4ICWS5SOjw7gp99nBpXBasapwtZF1fIM3H2gYTM ;
    nt:wasCreatedFromPubinfoTemplate ns1:RA2vCBXZf-icEcVRGhulJXugTGxpsV5yVr9yqCI1bQh4A , ns1:RAA2MfqdBCzmz9yVWjKLXNbyfBNcwsMmOqcNUxkk1maIM , ns1:RABngHbKpoJ3U9Nebc8mX_KUdv_vXw28EejqAyQya5zVA , ns1:RAh1gm83JiG5M6kDxXhaYT1l49nCzyrckMvTzcPn-iv90 ;
    nt:wasCreatedFromTemplate ns1:RAJwu5sVubRqXY4t2gkSoGxWkMyZqnpkGTCPiTlmvi4so .
}