[ { "@graph" : [ { "@id" : "https://w3id.org/np/RA8ANQ5EatTd3zb3RbGesGgCCnAqW5ZmRK0dcN0PqhaIo", "@type" : [ "http://www.nanopub.org/nschema#Nanopublication" ], "http://www.nanopub.org/nschema#hasAssertion" : [ { "@id" : "https://w3id.org/np/RA8ANQ5EatTd3zb3RbGesGgCCnAqW5ZmRK0dcN0PqhaIo/assertion" } ], "http://www.nanopub.org/nschema#hasProvenance" : [ { "@id" : "https://w3id.org/np/RA8ANQ5EatTd3zb3RbGesGgCCnAqW5ZmRK0dcN0PqhaIo/provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo" : [ { "@id" : "https://w3id.org/np/RA8ANQ5EatTd3zb3RbGesGgCCnAqW5ZmRK0dcN0PqhaIo/pubinfo" } ] } ], "@id" : "https://w3id.org/np/RA8ANQ5EatTd3zb3RbGesGgCCnAqW5ZmRK0dcN0PqhaIo/Head" }, { "@graph" : [ { "@id" : "http://eurovoc.europa.eu/2919", "@type" : [ "http://schema.org/DefinedTerm" ], "http://schema.org/description" : [ { "@value" : "" } ], "http://schema.org/name" : [ { "@value" : "Environmental research" } ] }, { "@id" : "http://eurovoc.europa.eu/3941", "@type" : [ "http://schema.org/DefinedTerm" ], "http://schema.org/description" : [ { "@value" : "" } ], "http://schema.org/name" : [ { "@value" : "Life sciences" } ] }, { "@id" : "http://eurovoc.europa.eu/3946", "@type" : [ "http://schema.org/DefinedTerm" ], "http://schema.org/description" : [ { "@value" : "" } ], "http://schema.org/name" : [ { "@value" : "Physical sciences" } ] }, { "@id" : "http://eurovoc.europa.eu/4921", "@type" : [ "http://schema.org/DefinedTerm" ], "http://schema.org/description" : [ { "@value" : "" } ], "http://schema.org/name" : [ { "@value" : "Biology" } ] }, { "@id" : "http://eurovoc.europa.eu/5881", "@type" : [ "http://schema.org/DefinedTerm" ], "http://schema.org/description" : [ { "@value" : "" } ], "http://schema.org/name" : [ { "@value" : "Medical science" } ] }, { "@id" : "http://w3id.org/ro-id/rohub/model#subject/-1950202695", "@type" : [ "https://w3id.org/contentdesc#Expression" ], "http://www.w3.org/2004/02/skos/core#prefLabel" : [ { "@value" : "replication of a published study" } ] }, { "@id" : "http://w3id.org/ro-id/rohub/model#subject/-2019570055", "@type" : [ "https://w3id.org/contentdesc#Expression" ], "http://www.w3.org/2004/02/skos/core#prefLabel" : [ { "@value" : "specification file" } ] }, { "@id" : "http://w3id.org/ro-id/rohub/model#subject/-502849182", "@type" : [ "https://w3id.org/contentdesc#Organization" ], "http://schema.org/name" : [ { "@value" : "immuneML" } ] }, { "@id" : "http://w3id.org/ro-id/rohub/model#subject/100082784", "@type" : [ "https://w3id.org/contentdesc#Concept" ], "http://www.w3.org/2004/02/skos/core#prefLabel" : [ { "@value" : "file" } ] }, { "@id" : "http://w3id.org/ro-id/rohub/model#subject/101172315", "@type" : [ "https://w3id.org/contentdesc#Concept" ], "http://www.w3.org/2004/02/skos/core#prefLabel" : [ { "@value" : "dataset" } ] }, { "@id" : "http://w3id.org/ro-id/rohub/model#subject/112303", "@type" : [ "https://w3id.org/contentdesc#Concept" ], "http://www.w3.org/2004/02/skos/core#prefLabel" : [ { "@value" : "guideline" } ] }, { "@id" : "http://w3id.org/ro-id/rohub/model#subject/117402", "@type" : [ "https://w3id.org/contentdesc#Concept" ], "http://www.w3.org/2004/02/skos/core#prefLabel" : [ { "@value" : "dataset" } ] }, { "@id" : "http://w3id.org/ro-id/rohub/model#subject/1592880816", "@type" : [ "https://w3id.org/contentdesc#Expression" ], "http://www.w3.org/2004/02/skos/core#prefLabel" : [ { "@value" : "use the dataset" } ] }, { "@id" : "http://w3id.org/ro-id/rohub/model#subject/1861112172", "@type" : [ "https://w3id.org/contentdesc#Expression" ], "http://www.w3.org/2004/02/skos/core#prefLabel" : [ { "@value" : "README.txt file" } ] }, { "@id" : "http://w3id.org/ro-id/rohub/model#subject/2717", "@type" : [ "https://w3id.org/contentdesc#Concept" ], "http://www.w3.org/2004/02/skos/core#prefLabel" : [ { "@value" : "study" } ] }, { "@id" : "http://w3id.org/ro-id/rohub/model#subject/4181", "@type" : [ "https://w3id.org/contentdesc#Concept" ], "http://www.w3.org/2004/02/skos/core#prefLabel" : [ { "@value" : "reproduction" } ] }, { "@id" : "http://w3id.org/ro-id/rohub/model#subject/499582328", "@type" : [ "https://w3id.org/contentdesc#Expression" ], "http://www.w3.org/2004/02/skos/core#prefLabel" : [ { "@value" : "immuneML use case 1" } ] }, { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/", "@type" : [ "http://purl.org/wf4ever/ro#ResearchObject", "http://purl.org/wf4ever/roevo#LiveRO", "http://schema.org/Dataset", "http://w3id.org/ro/earth-science#DataResearchObject", "https://w3id.org/ro/terms/earth-science#DataResearchObject" ], "http://schema.org/about" : [ { "@id" : "http://eurovoc.europa.eu/2919" }, { "@id" : "http://eurovoc.europa.eu/3941" }, { "@id" : "http://eurovoc.europa.eu/3946" }, { "@id" : "http://eurovoc.europa.eu/4921" }, { "@id" : "http://eurovoc.europa.eu/5881" } ], "http://schema.org/author" : [ { "@id" : "mailto:milena.pavlovic@rohub.com" } ], "http://schema.org/contentSize" : [ { "@type" : "http://www.w3.org/2001/XMLSchema#integer", "@value" : "7754" } ], "http://schema.org/contentUrl" : [ { "@value" : "https://api.rohub.org/api/ros/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/crate/download/" } ], "http://schema.org/creator" : [ { "@id" : "mailto:georgehadib@gmail.com" } ], "http://schema.org/dateCreated" : [ { "@value" : "2022-03-22 00:43:32.837367+00:00" } ], "http://schema.org/dateModified" : [ { "@value" : "2025-03-05 00:53:54.083290+00:00" } ], "http://schema.org/datePublished" : [ { "@value" : "2022-03-22 00:43:32.837367+00:00" } ], "http://schema.org/description" : [ { "@value" : "This dataset contains the original specification files and complete results for immuneML use case 1: Replication of a published study inside immuneML.\n\n\nTo use the dataset you should follow the guidelines in the README.txt file contained within the dataset." } ], "http://schema.org/encodingFormat" : [ { "@value" : "application/ld+json" } ], "http://schema.org/hasPart" : [ { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/folders/5de6274b-2698-46d6-ae64-d4d92c5b8a5a" }, { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/folders/8190ed8a-9dea-44e5-9f3d-c6272be86205" }, { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/folders/82864e7f-7fd0-4971-b22b-89225cbc21f8" }, { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/folders/facbc3ba-64db-46fc-b93f-91fdab9bea90" } ], "http://schema.org/identifier" : [ { "@value" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f" } ], "http://schema.org/license" : [ { "@id" : "https://choosealicense.com/no-permission/" } ], "http://schema.org/name" : [ { "@value" : "immuneML use case 1: Replication of a published study inside immuneML." } ], "http://w3id.org/ro-id/rohub/model#creation_mode" : [ { "@value" : "MANUAL" } ], "https://www.w3.org/ns/iana/link-relations/relation#cite-as" : [ { "@value" : "Milena Pavlović. \"immuneML use case 1: Replication of a published study inside immuneML..\" ROHub. Mar 22 ,2022. https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f." } ] }, { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/#enrichment_service-account-enrichment", "@type" : [ "http://xmlns.com/foaf/0.1/Agent" ], "http://schema.org/name" : [ { "@value" : "service-account-enrichment" } ] }, { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/folders/5de6274b-2698-46d6-ae64-d4d92c5b8a5a", "@type" : [ "http://purl.org/wf4ever/wf4ever#Folder", "http://schema.org/Dataset" ], "http://schema.org/name" : [ { "@value" : "biblio" } ] }, { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/folders/8190ed8a-9dea-44e5-9f3d-c6272be86205", "@type" : [ "http://purl.org/wf4ever/wf4ever#Folder", "http://schema.org/Dataset" ], "http://schema.org/name" : [ { "@value" : "raw data" } ] }, { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/folders/82864e7f-7fd0-4971-b22b-89225cbc21f8", "@type" : [ "http://purl.org/wf4ever/wf4ever#Folder", "http://schema.org/Dataset" ], "http://schema.org/name" : [ { "@value" : "metadata" } ] }, { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/folders/facbc3ba-64db-46fc-b93f-91fdab9bea90", "@type" : [ "http://purl.org/wf4ever/wf4ever#Folder", "http://schema.org/Dataset" ], "http://schema.org/hasPart" : [ { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/resources/fb35ef14-64c9-4140-892a-39dc2e99cca4" } ], "http://schema.org/name" : [ { "@value" : "data" } ] }, { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/resources/fb35ef14-64c9-4140-892a-39dc2e99cca4", "@type" : [ "http://purl.org/wf4ever/wf4ever#Dataset", "http://purl.org/wf4ever/wf4ever#Resource", "http://schema.org/MediaObject" ], "http://purl.org/dc/terms/bibliographicCitation" : [ { "@value" : "Pavlović, M. (2021).immuneML use case 1: Replication of a published study inside immuneML. [Data set]. Norstore. https://doi.org/10.11582/2021.00008" } ], "http://purl.org/dc/terms/rightsHolder" : [ { "@value" : "Lonneke Scheffer" } ], "http://purl.org/dc/terms/type" : [ { "@value" : "Experiment" } ], "http://schema.org/author" : [ { "@id" : "mailto:georgehadib@gmail.com" } ], "http://schema.org/contentUrl" : [ { "@value" : "https://archive.sigma2.no/pages/public/datasetDetail.jsf?id=10.11582/2021.00008" } ], "http://schema.org/creator" : [ { "@id" : "mailto:georgehadib@gmail.com" } ], "http://schema.org/dateCreated" : [ { "@value" : "2021-02-16 00:00:00" } ], "http://schema.org/dateModified" : [ { "@value" : "2022-03-22 00:43:48.054345+00:00" } ], "http://schema.org/description" : [ { "@value" : "This dataset contains the original specification files and complete results for immuneML use case 1: Replication of a published study inside immuneML.\n\n\nTo use the dataset you should follow the guidelines in the README.txt file contained within the dataset." } ], "http://schema.org/license" : [ { "@id" : "https://choosealicense.com/no-permission/" } ], "http://schema.org/name" : [ { "@value" : "immuneML use case 1: Replication of a published study inside immuneML." } ], "http://schema.org/sdDatePublished" : [ { "@value" : "2021-02-16 00:00:00" } ], "https://schema.org/maintainer" : [ { "@value" : "Lonneke Scheffer" } ] }, { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/ro-crate-metadata.json", "@type" : [ "http://schema.org/CreativeWork" ], "http://purl.org/dc/terms/conformsTo" : [ { "@id" : "https://w3id.org/ro/crate/1.1" } ], "http://schema.org/about" : [ { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/" } ] }, { "@id" : "mailto:georgehadib@gmail.com", "@type" : [ "http://xmlns.com/foaf/0.1/Agent" ], "http://schema.org/name" : [ { "@value" : "Geo H." } ] }, { "@id" : "mailto:milena.pavlovic@rohub.com", "@type" : [ "http://xmlns.com/foaf/0.1/Agent" ], "http://schema.org/email" : [ { "@value" : "milena.pavlovic@rohub.com" } ], "http://schema.org/name" : [ { "@value" : "Milena Pavlović" } ] } ], "@id" : "https://w3id.org/np/RA8ANQ5EatTd3zb3RbGesGgCCnAqW5ZmRK0dcN0PqhaIo/assertion" }, { "@graph" : [ { "@id" : "https://w3id.org/np/RA8ANQ5EatTd3zb3RbGesGgCCnAqW5ZmRK0dcN0PqhaIo/assertion", "http://www.w3.org/ns/prov#wasDerivedFrom" : [ { "@id" : "https://api.rohub.org/api/ros/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/crate/download/ro-crate-metadata.json" } ] } ], "@id" : "https://w3id.org/np/RA8ANQ5EatTd3zb3RbGesGgCCnAqW5ZmRK0dcN0PqhaIo/provenance" }, { "@graph" : [ { "@id" : "https://w3id.org/np/RA8ANQ5EatTd3zb3RbGesGgCCnAqW5ZmRK0dcN0PqhaIo", "@type" : [ "http://purl.org/nanopub/x/RoCrateNanopub" ], "http://purl.org/dc/terms/created" : [ { "@type" : "http://www.w3.org/2001/XMLSchema#dateTime", "@value" : "2026-03-03T16:18:39.432+01:00" } ], "http://purl.org/dc/terms/creator" : [ { "@id" : "https://w3id.org/kpxl/gen/terms/RoCrateBot" } ], "http://purl.org/nanopub/x/introduces" : [ { "@id" : "https://w3id.org/ro-id/2243f9c9-5c9d-4ad1-8219-a6daed0a7d4f/" } ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "immuneML use case 1: Replication of a published study inside immuneML." } ] }, { "@id" : "https://w3id.org/np/RA8ANQ5EatTd3zb3RbGesGgCCnAqW5ZmRK0dcN0PqhaIo/sig", "http://purl.org/nanopub/x/hasAlgorithm" : [ { "@value" : "RSA" } ], "http://purl.org/nanopub/x/hasPublicKey" : [ { "@value" : "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAxszSDYX5tuCSkP7UiCtftYPFNQVTjgNu0I5fwdML2DLRDlp0xzmsQXRk8oHuvwGvG1aMjj6cpUqO+0rz2Sg/wvHOgUpkRH8VJXvmlkhafMLCMtUtk5JIx7e+fkzCby+fnmD7kMkGLrT+OaExWwEDmNlCAt0TPKcHSdwsjso2isXjtAsGevyCMke8ufnFYpjs746JES1eNzVnHnn2Kp/lqcm60GM+J8dLgRZp7fX0anW098xhKym6+xXFzqeju0vYRIHBPerv+r7skWxwk+a7Sd8msqVeYEv6NTqnyWvyWb6Yh8cvj04N6qm/T6C5FUPLQhzSaQgMVMU6yLqjPuu9DwIDAQAB" } ], "http://purl.org/nanopub/x/hasSignature" : [ { "@value" : "EFoiJXQsLWbLqHvsd3Os7U7fpmttiALiQ3IxRsRg/cbBToSYWpte62q5PZf8PQQfGpIJZ8WYy5R5s88Df7Sg6+hbVJH1RJUZzGPMrPJdErYitEu7izWYd1QtxHVB5KUHCKhxIS+ONNXDNgcvP5zkz1IQk9o2hIUoIZS2/lVeRTzlPl8dLZgUBRTCZIn+qNgC3sR63s6ki09bZJ+n+HJHbyj9e9bgr8cq36WEb1zKPY6Us4sEmS/PoZi+B47E4ed5NHnjIhVpso08E/4wtHwIZvku8LI+BGLOqYxSKj0CZlreMfLvJkVJ2WsSAXV1X4meTnbIvKOnLdWQIeHVK9WRSQ==" } ], "http://purl.org/nanopub/x/hasSignatureTarget" : [ { "@id" : "https://w3id.org/np/RA8ANQ5EatTd3zb3RbGesGgCCnAqW5ZmRK0dcN0PqhaIo" } ], "http://purl.org/nanopub/x/signedBy" : [ { "@id" : "https://w3id.org/kpxl/gen/terms/RoCrateBot" } ] } ], "@id" : "https://w3id.org/np/RA8ANQ5EatTd3zb3RbGesGgCCnAqW5ZmRK0dcN0PqhaIo/pubinfo" } ]