sub:assertion {
rdf:type rdfs:label "is an" .
rdfs:comment rdfs:label "has the free-text comment" .
<
https://w3id.org/biolink/vocab/OrganismTaxonToOrganismTaxonAssociation>
rdfs:label "association between two organism taxa" .
<
https://w3id.org/biolink/vocab/object>
rdfs:label "refers to - links an association to its object" .
<
https://w3id.org/biolink/vocab/predicate>
rdfs:label "refers to the relation (between subject taxon and object taxon)" .
<
https://w3id.org/biolink/vocab/subject>
rdfs:label "refers to - links an association to its subject" .
<
https://w3id.org/kpxl/biodiv/terms/hasObjectLifeCycleStage>
rdfs:label "refers to the object taxon's life cycle stage" .
<
https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage>
rdfs:label "refers to the subject taxon's life cycle stage" .
<
https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition>
rdfs:label "is used as defined in" .
<
https://w3id.org/kpxl/biodiv/terms/hasTaxonName>
rdfs:label "has the name - links a taxon usage to a taxon name" .
sub:assertion dct:description """<p>Such a nanopublication expresses an association between classes of organisms (taxa), a subject taxon and an object taxon, for example expressing that the organisms of the subject taxon prey on organisms of the object taxon.</p>
<p>For expressing observations of interactions between individual organisms, please use the alternative template \"Associations between organisms\".</p>""" ;
a nt:AssertionTemplate ;
rdfs:label "Expressing an association between two organism taxa" ;
nt:hasDefaultProvenance ns1:RA2VjRiJ5AsNnPHDXuOqvsEJwTwqtj5rBb-OFkpPOzd9s ;
nt:hasNanopubLabelPattern "${subjtaxonname} - ${relation} - ${objtaxonname}" ;
nt:hasStatement sub:st00 ,
sub:st05 ,
sub:st10 ,
sub:st11 ,
sub:st12 ,
sub:st20 ,
sub:st40 ,
sub:st41 ,
sub:st42 ,
sub:st50 ,
sub:st60 ;
nt:hasTag "Biodiversity" ;
nt:hasTargetNanopubType <
https://w3id.org/kpxl/biodiv/terms/BiodivNanopub> .
sub:association a nt:IntroducedResource ,
nt:LocalResource ;
rdfs:label "this association" .
sub:comment a nt:LongLiteralPlaceholder ;
rdfs:label "short explanation related to the above statement" .
sub:objlifecyclestage a nt:RestrictedChoicePlaceholder ;
rdfs:label "the life cycle stage of the object taxon" ;
nt:possibleValuesFrom ns1:RAVZS2MV-siFEqsgFTtgSoKA5qJkp7r1nM_n-MqPkvgdE .
sub:objtaxon a nt:LocalResource ;
rdfs:label "the object taxon concept" .
sub:objtaxondef a nt:ExternalUriPlaceholder ;
rdfs:label "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)" ;
nt:hasRegex "(https://doi.org/|https://treatment.plazi.org/id/).+" .
sub:objtaxonname a nt:GuidedChoicePlaceholder ;
rdfs:label "search and select from list (if not found, you may paste URL from IPNI, MycoBank, Index Fungorum, or ZooBank)" ;
nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .
sub:relation a nt:RestrictedChoicePlaceholder ;
rdfs:label "the type of relation between the two taxa" ;
nt:possibleValuesFrom <
https://w3id.org/np/RAQUHrC3sP4AYu7i7pt-eVOMnyUtwi2P8LVZDWxhffEAI> .
sub:st00 rdf:object <
https://w3id.org/biolink/vocab/OrganismTaxonToOrganismTaxonAssociation> ;
rdf:predicate rdf:type ;
rdf:subject sub:association .
sub:st05 rdf:object sub:relation ;
rdf:predicate <
https://w3id.org/biolink/vocab/predicate> ;
rdf:subject sub:association .
sub:st10 rdf:object sub:subjtaxon ;
rdf:predicate <
https://w3id.org/biolink/vocab/subject> ;
rdf:subject sub:association .
sub:st11 rdf:object sub:subjtaxonname ;
rdf:predicate <
https://w3id.org/kpxl/biodiv/terms/hasTaxonName> ;
rdf:subject sub:subjtaxon .
sub:st12 rdf:object sub:subjtaxondef ;
rdf:predicate <
https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition> ;
rdf:subject sub:subjtaxon ;
a nt:OptionalStatement .
sub:st20 rdf:object sub:subjlifecyclestage ;
rdf:predicate <
https://w3id.org/kpxl/biodiv/terms/hasSubjectLifeCycleStage> ;
rdf:subject sub:association ;
a nt:OptionalStatement .
sub:st40 rdf:object sub:objtaxon ;
rdf:predicate <
https://w3id.org/biolink/vocab/object> ;
rdf:subject sub:association .
sub:st41 rdf:object sub:objtaxonname ;
rdf:predicate <
https://w3id.org/kpxl/biodiv/terms/hasTaxonName> ;
rdf:subject sub:objtaxon .
sub:st42 rdf:object sub:objtaxondef ;
rdf:predicate <
https://w3id.org/kpxl/biodiv/terms/hasTaxonConceptDefinition> ;
rdf:subject sub:objtaxon ;
a nt:OptionalStatement .
sub:st50 rdf:object sub:objlifecyclestage ;
rdf:predicate <
https://w3id.org/kpxl/biodiv/terms/hasObjectLifeCycleStage> ;
rdf:subject sub:association ;
a nt:OptionalStatement .
sub:st60 rdf:object sub:comment ;
rdf:predicate rdfs:comment ;
rdf:subject sub:association ;
a nt:OptionalStatement .
sub:subjlifecyclestage a nt:RestrictedChoicePlaceholder ;
rdfs:label "the life cycle stage of the subject taxon" ;
nt:possibleValuesFrom ns1:RAVZS2MV-siFEqsgFTtgSoKA5qJkp7r1nM_n-MqPkvgdE .
sub:subjtaxon a nt:LocalResource ;
rdfs:label "the subject taxon concept" .
sub:subjtaxondef a nt:ExternalUriPlaceholder ;
rdfs:label "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)" ;
nt:hasRegex "(https://doi.org/|https://treatment.plazi.org/id/).+" .
sub:subjtaxonname a nt:GuidedChoicePlaceholder ;
rdfs:label "search and select from list (if not found, paste identifying URI from IPNI, MycoBank, Index Fungorum, or Zoobank)" ;
nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .
}