@prefix pplan: <
http://purl.org/net/p-plan#
> .
@prefix dce: <
http://purl.org/dc/elements/1.1/
> .
@prefix this: <
http://purl.org/np/RAYXMGguj-BBzZFwSCU7CwLH-LmIAkiJ3k2xDHz-UJkVo
> .
@prefix sub: <
http://purl.org/np/RAYXMGguj-BBzZFwSCU7CwLH-LmIAkiJ3k2xDHz-UJkVo#
> .
@prefix bs: <
https://bioschemas.org/profiles/LabProtocol/0.4-DRAFT-2020_07_23/#
> .
@prefix np: <
http://www.nanopub.org/nschema#
> .
@prefix pav: <
http://purl.org/pav/
> .
@prefix authority: <
https://hypothes.is/a/
> .
@prefix npx: <
http://purl.org/nanopub/x/
> .
@prefix xsd: <
http://www.w3.org/2001/XMLSchema#
> .
@prefix rdfs: <
http://www.w3.org/2000/01/rdf-schema#
> .
@prefix prov: <
http://www.w3.org/ns/prov#
> .
@prefix sp: <
http://purl.org/net/SMARTprotocol#
> .
sub:Head
{
this:
np:hasAssertion
sub:assertion
;
np:hasProvenance
sub:provenance
;
np:hasPublicationInfo
sub:pubInfo
;
a
np:Nanopublication
.
}
sub:assertion
{
<
http://purl.obolibrary.org/obo/PO_0009005
>
rdfs:label
"root" .
<
http://purl.obolibrary.org/obo/PO_0025034
>
rdfs:label
"leaf" .
sub:_1
rdfs:label
"recalcitrant samples" .
sub:_2
rdfs:label
"recalcitrant samples" .
sub:_3
rdfs:label
"mortar" .
sub:_4
rdfs:label
"pestle" .
sub:_5
rdfs:label
"extraction buffer" .
sub:_6
rdfs:label
"liquid nitrogen" .
sub:step
dce:description
"Ground samples (leaf, shoot, root, and recalcitrant samples, approximately 0.5-1 g) using 1 ml of the extraction buffer with or without liquid nitrogen in mortar and pestle that are sterilized.CRITICAL STEP The procedure are carried out at room temperature except the centrifugation steps (at 4℃) as well as the time of precipitating of the nucleic acid using the isopropanol (on ice).CRITICAL STEP Severely disrupt the tissues to create the glaze mode of samples." ;
sp:hasExperimentalInput
<
http://purl.obolibrary.org/obo/PO_0009005
> , <
http://purl.obolibrary.org/obo/PO_0025034
> ,
sub:_1
, <
http://www.ebi.ac.uk/efo/EFO_0000992
> ;
a
pplan:Step
;
bs:bioSampleUsed
<
http://purl.obolibrary.org/obo/PO_0009005
> , <
http://purl.obolibrary.org/obo/PO_0025034
> ,
sub:_2
, <
http://www.ebi.ac.uk/efo/EFO_0000992
> ;
bs:labEquipmentUsed
sub:_3
,
sub:_4
;
bs:reagentUsed
sub:_5
,
sub:_6
.
<
http://www.ebi.ac.uk/efo/EFO_0000992
>
rdfs:label
"shoot" .
}
sub:provenance
{
sub:assertion
pav:createdWith
<
https://nanotate.bitsfetch.com
> ;
prov:generatedAtTime
"2021-02-24T15:14:41.313929"^^
xsd:dateTime
;
prov:wasAttributedTo
<
https://hypothes.is/users/zuluaga.lizzz
> .
}
sub:pubInfo
{
sub:assertion
prov:wasDerivedFrom
authority:6x4JZnbXEeuDWO8NMPk5sQ
,
authority:FNjJCHbYEeuipT8ixxflxQ
,
authority:KerCfnbYEeuNBu-K6NdISQ
,
authority:Q8mioHbYEeuTgUfhoHkUgQ
,
authority:Z7zKcHbYEeuzMNcKBR5nMQ
,
authority:fyGboHbYEeu2PcOWtuIVzg
,
authority:kK_7vnbYEeu9LfdPD1KPPA
,
authority:mci4InbXEeujlEfzlYnwTg
,
authority:z9HP0HbXEeunbqtSwqQywQ
.
sub:sig
npx:hasAlgorithm
"RSA" ;
npx:hasPublicKey
"MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCEOtYac15zsWN/LAu3q7YFdW0UZNfX3BAarHW/LB1DHGcz0yYr0v7hKGbnCLJ+UkDfu3Mgj7BnCm1s8ulMULKfF4YjqS2YKHYZjNKVaIjSigFOpjOwIx99+qPlvd5CuG+Gia/sJA05jy2bPKLwb/kmVeeX0zORZudWLyRMLXp8UQIDAQAB" ;
npx:hasSignature
"bBIqCAPyF8g3c2Snotre9igTbITe8/nU6eYb9RgxcVWV6tZVgZ+XVIAgrlXZk4YXJtdzoo85dXXfayr5exq+ctAxHoW72jusVCL6bNnuBfcP/kro1ppLoO/ur1kzDihmwC3S9Q8HKUaGKi2d8xJuBmtNPrGtenY7MbnR/rmMAK4=" ;
npx:hasSignatureTarget
this:
.
this:
npx:introduces
sub:step
;
prov:generatedAtTime
"2021-02-24T15:14:41.313929"^^
xsd:dateTime
;
prov:wasAttributedTo
<
https://hypothes.is/users/zuluaga.lizzz
> .
}