Nanopublications

@prefix dcterms: <http://purl.org/dc/terms/> .
@prefix ns1: <http://purl.org/np/> .
@prefix this: <http://purl.org/np/RAwEPliMzsMKtz8JHXdQuFm9hiyHrByRzxacz2oXQwD9E> .
@prefix sub: <http://purl.org/np/RAwEPliMzsMKtz8JHXdQuFm9hiyHrByRzxacz2oXQwD9E#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix orcid: <https://orcid.org/> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix biolink: <https://w3id.org/biolink/vocab/> .
@prefix dao: <https://w3id.org/dao/dao#> .

sub:Head {
  this: np:hasAssertion sub:assertion ;
    np:hasProvenance sub:provenance ;
    np:hasPublicationInfo sub:pubinfo ;
    a np:Nanopublication .
}

sub:assertion {
  sub:assertion a nt:AssertionTemplate ;
    rdfs:label "Defining a biomedical association" ;
    nt:hasStatement sub:st00 , sub:st01 , sub:st02 , sub:st03 , sub:st04 , sub:st05 , sub:st06 , sub:st07 .
  sub:association a nt:LocalResource ;
    rdfs:label "This association" .
  sub:context a nt:LiteralPlaceholder ;
    rdfs:label "describe in which context this assertion is true" .
  sub:object a nt:GuidedChoicePlaceholder ;
    rdfs:label "target biomedical entity" ;
    nt:possibleValuesFromApi "http://robokop.renci.org:2433/lookup?limit=10&string=" .
  sub:objectType a nt:GuidedChoicePlaceholder ;
    rdfs:label "search for the object class in the BioLink model" ;
    nt:possibleValue biolink:ChemicalSubstance , biolink:Disease , biolink:Drug , biolink:Gene , biolink:Protein ;
    nt:possibleValuesFromApi "http://data.bioontology.org/search?pagesize=20&apikey=fd451bec-eacd-4519-b972-90fb6c7007cb&ontologies=BLM&include_properties=true&q=" .
  sub:readableassertion a nt:LiteralPlaceholder ;
    rdfs:label "describe the assertion concisely (e.g. tylenol treats pain in adults patients)" .
  sub:relation a nt:GuidedChoicePlaceholder ;
    rdfs:label "search for the relation in the BioLink model" ;
    nt:possibleValue biolink:affects , biolink:correlated_with , biolink:interacts_with , biolink:treated_by , biolink:treats ;
    nt:possibleValuesFromApi "http://data.bioontology.org/search?pagesize=20&apikey=fd451bec-eacd-4519-b972-90fb6c7007cb&ontologies=BLM&include_properties=true&q=" .
  sub:st00 rdf:object biolink:Association ;
    rdf:predicate rdf:type ;
    rdf:subject sub:association ;
    a rdf:Statement ;
    nt:statementOrder 0 .
  sub:st01 rdf:object sub:readableassertion ;
    rdf:predicate rdfs:label ;
    rdf:subject sub:association ;
    a rdf:Statement ;
    nt:statementOrder 1 .
  sub:st02 rdf:object sub:subject ;
    rdf:predicate biolink:subject ;
    rdf:subject sub:association ;
    a rdf:Statement ;
    nt:statementOrder 2 .
  sub:st03 rdf:object sub:subjectType ;
    rdf:predicate rdf:type ;
    rdf:subject sub:subject ;
    a rdf:Statement ;
    nt:statementOrder 2 .
  sub:st04 rdf:object sub:relation ;
    rdf:predicate biolink:relation ;
    rdf:subject sub:association ;
    a rdf:Statement ;
    nt:statementOrder 3 .
  sub:st05 rdf:object sub:object ;
    rdf:predicate biolink:object ;
    rdf:subject sub:association ;
    a rdf:Statement ;
    nt:statementOrder 4 .
  sub:st06 rdf:object sub:objectType ;
    rdf:predicate rdf:type ;
    rdf:subject sub:object ;
    a rdf:Statement ;
    nt:statementOrder 2 .
  sub:st07 rdf:object sub:context ;
    rdf:predicate dao:context ;
    rdf:subject sub:association ;
    a nt:OptionalStatement ;
    nt:statementOrder 5 .
  sub:subject a nt:GuidedChoicePlaceholder ;
    rdfs:label "source biomedical entity" ;
    nt:possibleValuesFromApi "http://robokop.renci.org:2433/lookup?limit=10&string=" .
  sub:subjectType a nt:GuidedChoicePlaceholder ;
    rdfs:label "search for the subject class in the BioLink model" ;
    nt:possibleValue biolink:ChemicalSubstance , biolink:Disease , biolink:Drug , biolink:Gene , biolink:Protein ;
    nt:possibleValuesFromApi "http://data.bioontology.org/search?pagesize=20&apikey=fd451bec-eacd-4519-b972-90fb6c7007cb&ontologies=BLM&include_properties=true&q=" .
  rdf:type rdfs:label "is a" .
  rdfs:label rdfs:label "asserts that" .
  biolink:description rdfs:label "is described by" .
  biolink:id rdfs:label "has id" .
  biolink:object rdfs:label "has object" .
  biolink:relation rdfs:label "has relation" .
  biolink:subject rdfs:label "has subject" .
  dao:context rdfs:label "has context" .
}

sub:provenance {
sub:assertion prov:wasAttributedTo orcid:0000-0003-4727-9435 .
}

sub:pubinfo {
  sub:sig npx:hasAlgorithm "RSA" ;
    npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCR9fz0fKCdWOWC+pxhkQhEM/ppbdIYe5TLSdj+lJzSlv9mYBaPgrzVezSwwbmhlHBPDZa4/vHycU315BdmUGq+pXllp9+rWFfrb+kBJwhZjpG6BeyyXBsRFz4jmQVxl/ZYHilQTh/XalYzKkEAyTiEMPee4Kz61PaWOKH24CsnOQIDAQAB" ;
    npx:hasSignature "d2P8THM8GOVKT++f8K7ZsT36bDf96btCb7ubV4vnHRWU9ajUDTHHr/6ogGbjzjebGxCTGk5FkwKU0NACN+aqgq2pLf7D4WwtAkLHM6K1yTSnSMtE8TLR6rKlOk3mkLa04h5hFfzj3V7OFNCA97B75Cif+FqmEMq1S+FZ/Ey90vU=" ;
    npx:hasSignatureTarget this: .
  this: dcterms:created "2020-11-18T10:00:00+01:00"^^xsd:dateTime ;
    dcterms:creator orcid:0000-0003-4727-9435 ;
    npx:supersedes ns1:RA4jgstrKZjsWlc7eEL0Dm_lbR6-UrdRjRMZRB0nlek6c .
}