@prefix pplan: <
http://purl.org/net/p-plan#
> .
@prefix this: <
http://purl.org/np/RAysi2SPEKm8TaYscHjRtWBr9tT0a2IA9d0jhRLRDP8bc
> .
@prefix sub: <
http://purl.org/np/RAysi2SPEKm8TaYscHjRtWBr9tT0a2IA9d0jhRLRDP8bc#
> .
@prefix bs: <
https://bioschemas.org/profiles/LabProtocol/0.4-DRAFT-2020_07_23/#
> .
@prefix np: <
http://www.nanopub.org/nschema#
> .
@prefix pav: <
http://purl.org/pav/
> .
@prefix authority: <
https://hypothes.is/a/
> .
@prefix npx: <
http://purl.org/nanopub/x/
> .
@prefix xsd: <
http://www.w3.org/2001/XMLSchema#
> .
@prefix rdfs: <
http://www.w3.org/2000/01/rdf-schema#
> .
@prefix prov: <
http://www.w3.org/ns/prov#
> .
@prefix sp: <
http://purl.org/net/SMARTprotocol#
> .
@prefix dc: <
http://purl.org/dc/elements/1.1/
> .
sub:Head
{
this:
np:hasAssertion
sub:assertion
;
np:hasProvenance
sub:provenance
;
np:hasPublicationInfo
sub:pubInfo
;
a
np:Nanopublication
.
}
sub:assertion
{
<
http://purl.obolibrary.org/obo/CHEBI_17997
>
rdfs:label
"liquid nitrogen" .
<
http://purl.obolibrary.org/obo/PO_0009005
>
rdfs:label
"root" .
<
http://purl.obolibrary.org/obo/PO_0025034
>
rdfs:label
"leaf" .
sub:_1
rdfs:label
"recalcitrant samples" .
sub:_2
rdfs:label
"recalcitrant samples" .
sub:_3
rdfs:label
"pestle" .
sub:_4
rdfs:label
"mortar" .
sub:_5
rdfs:label
"extraction buffer" .
sub:step
dc:description
"Ground samples (leaf, shoot, root, and recalcitrant samples, approximately 0.5-1 g) using 1 ml of the extraction buffer with or without liquid nitrogen in mortar and pestle that are sterilized.CRITICAL STEP The procedure are carried out at room temperature except the centrifugation steps (at 4℃) as well as the time of precipitating of the nucleic acid using the isopropanol (on ice).CRITICAL STEP Severely disrupt the tissues to create the glaze mode of samples." ;
sp:hasExperimentalInput
<
http://purl.obolibrary.org/obo/PO_0009005
> , <
http://purl.obolibrary.org/obo/PO_0025034
> ,
sub:_1
, <
http://www.ebi.ac.uk/efo/EFO_0000992
> ;
a
pplan:Step
;
bs:bioSampleUsed
<
http://purl.obolibrary.org/obo/PO_0009005
> , <
http://purl.obolibrary.org/obo/PO_0025034
> ,
sub:_2
, <
http://www.ebi.ac.uk/efo/EFO_0000992
> ;
bs:labEquipmentUsed
sub:_3
,
sub:_4
;
bs:reagentUsed
<
http://purl.obolibrary.org/obo/CHEBI_17997
> ,
sub:_5
.
<
http://www.ebi.ac.uk/efo/EFO_0000992
>
rdfs:label
"shoot" .
}
sub:provenance
{
sub:assertion
pav:createdWith
<
https://nanotate.bitsfetch.com
> ;
prov:generatedAtTime
"2021-03-05T11:34:30.681034"^^
xsd:dateTime
;
prov:wasAttributedTo
<
https://hypothes.is/users/iannotate
> .
}
sub:pubInfo
{
sub:assertion
prov:wasDerivedFrom
authority:3HMP7H3GEeuJHqtY8IH5vg
,
authority:8vHAnH3GEeu_64_J_NTjhg
,
authority:AsPl1n3HEeuSaoMKfzNR1A
,
authority:U4k0VH3GEeuKIutEUEKDNA
,
authority:bwzvDn3GEeutc5OnvN9V8Q
,
authority:hB9uOn3GEeu1xVt7eD6q9A
,
authority:mxfzeH3GEeucLV_A-MvnNw
,
authority:rTnKzH3GEeuH5UcMOhvLdw
,
authority:winXQn3GEeudQt97vsqqag
.
sub:sig
npx:hasAlgorithm
"RSA" ;
npx:hasPublicKey
"MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCEOtYac15zsWN/LAu3q7YFdW0UZNfX3BAarHW/LB1DHGcz0yYr0v7hKGbnCLJ+UkDfu3Mgj7BnCm1s8ulMULKfF4YjqS2YKHYZjNKVaIjSigFOpjOwIx99+qPlvd5CuG+Gia/sJA05jy2bPKLwb/kmVeeX0zORZudWLyRMLXp8UQIDAQAB" ;
npx:hasSignature
"eSiNGrBxHqXmxmmCqrlvmweZZTeW3VTUrw2lTNwq4K2WW1chx/PJ3CRcPlaXad5Wic4dQlwR/7H4c84jKVZo8IUwjwr2r6Xz48Ed9NE+3sVFVVzxf9PySoK8MkasyqBAHRrxOqL3wBaT9oNSczexTwaTkFveF3RvjMPANeaE7+Q=" ;
npx:hasSignatureTarget
this:
.
this:
npx:introduces
sub:step
;
prov:generatedAtTime
"2021-03-05T11:34:30.681034"^^
xsd:dateTime
;
prov:wasAttributedTo
<
https://hypothes.is/users/iannotate
> .
}